Package: pawscore 1.0.3
pawscore: Pain Assessment at Withdrawal Speeds (PAWS)
Automated pain scoring from paw withdrawal tracking data. Based on Jones et al. (2020) "A machine-vision approach for automated pain measurement at millisecond timescales" <doi:10.7554/eLife.57258>.
Authors:
pawscore_1.0.3.tar.gz
pawscore_1.0.3.zip(r-4.5)pawscore_1.0.3.zip(r-4.4)pawscore_1.0.3.zip(r-4.3)
pawscore_1.0.3.tgz(r-4.5-any)pawscore_1.0.3.tgz(r-4.4-any)pawscore_1.0.3.tgz(r-4.3-any)
pawscore_1.0.3.tar.gz(r-4.5-noble)pawscore_1.0.3.tar.gz(r-4.4-noble)
pawscore_1.0.3.tgz(r-4.4-emscripten)pawscore_1.0.3.tgz(r-4.3-emscripten)
pawscore.pdf |pawscore.html✨
pawscore/json (API)
| # Install 'pawscore' in R: |
| install.packages('pawscore', repos = c('https://crtwomey.r-universe.dev', 'https://cloud.r-project.org')) |
- jones2020.tracks - Jones et al. (2020) paw trajectory data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:9e1f474202. Checks:9 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 11 2025 |
| R-4.5-win | OK | Mar 11 2025 |
| R-4.5-mac | OK | Mar 11 2025 |
| R-4.5-linux | OK | Mar 11 2025 |
| R-4.4-win | OK | Mar 11 2025 |
| R-4.4-mac | OK | Mar 11 2025 |
| R-4.4-linux | OK | Mar 11 2025 |
| R-4.3-win | OK | Mar 11 2025 |
| R-4.3-mac | OK | Mar 11 2025 |
Exports:create_pain_modelcreate_strain_standarddefault_parametersdefault_standardsextract_featurespain_classpain_scoreset_parameters
Dependencies:brglm2enrichwithlatticeMASSMatrixnnetnumDerivsignal
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create a new pain model | create_pain_model |
| Create new strain standards | create_strain_standard |
| Default parameters for extracting paw features | default_parameters |
| Default strain-based standards for paw features | default_standards |
| Extract features for paw time series | extract_features |
| Jones et al. (2020) paw trajectory data | jones2020.tracks |
| Identify pain class based on pain score | pain_class |
| Scoring pain from paw features | pain_score |
| paws: Pain Assessment at Withdrawal Speeds | pawsscore |
| Convenience function for changing parameters | set_parameters |
